Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: P23820.1 RecName: Full=Retinochrome; AltName: Full=Retinal photoisomerase [Todarodes pacificus] ... Query length: 301 aa

Query: RecName: Full=Retinochrome; AltName: Full=Retinal photoisomerase ...

RecName: Full=Retinochrome; AltName: Full=Retinal photoisomerase [Todarodes pacificus]

301 aa protein

accession:P23820.1

Sequence Identical proteins

visual pigment-like receptor peropsin ...

visual pigment-like receptor peropsin [Danio rerio]

334 aa protein

accession:NP_001004654.1

Alignment Sequence Identical proteins

visual pigment-like receptor peropsin isoform 2 ...

visual pigment-like receptor peropsin isoform 2 [Mus musculus]

337 aa protein

accession:NP_033128.1

Alignment Sequence Identical proteins

visual pigment-like receptor peropsin isoform 4 ...

visual pigment-like receptor peropsin isoform 4 [Mus musculus]

257 aa protein

accession:NP_001396784.1

Alignment Sequence Identical proteins

visual pigment-like receptor peropsin ...

visual pigment-like receptor peropsin [Homo sapiens]

337 aa protein

accession:NP_006574.1

Alignment Sequence Identical proteins

retinal G protein coupled receptor a ...

retinal G protein coupled receptor a [Danio rerio]

295 aa protein

accession:NP_001017877.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001004654.1\|	visual pigment-like receptor peropsin [Danio rerio]	107	107	80%	8e-26	26.02%	NP_001004654.1
2 Select seq ref\|NP_033128.1\|	visual pigment-like receptor peropsin isoform 2 [Mus musculus]	107	107	80%	2e-25	29.44%	NP_033128.1
3 Select seq ref\|NP_006574.1\|	visual pigment-like receptor peropsin [Homo sapiens]	105	105	80%	5e-25	27.02%	NP_006574.1
4 Select seq ref\|NP_001396784.1\|	visual pigment-like receptor peropsin isoform 4 [Mus musculus]	101	101	59%	6e-24	32.24%	NP_001396784.1
5 Select seq ref\|NP_001017877.1\|	retinal G protein coupled receptor a [Danio rerio]	97.4	97.4	87%	3e-22	28.36%	NP_001017877.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments