Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
P41854.1
RecName: Full=FMRFamide-like neuropeptides; Contains: RecName: Full=Neuropeptide AF10; AltName: Full=GFGDEMSMPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF20; AltName: Full=GMPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF3; AltName: Full=AVPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF4; AltName: Full=GDVPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF13; AltName: Full=SDMPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF14; AltName: Full=SMPGVLRF-amide; Flags: Precursor [Ascaris suum]
...
Query length:
161 aa
DOMAINS: and other(s) domains
...
SQPNFLRF-amide
...
SQPNFLRF-amide [Caenorhabditis elegans]
142 aa protein
accession:NP_872078.1
SQPNFLRF-amide
...
SQPNFLRF-amide [Caenorhabditis elegans]
164 aa protein
accession:NP_872077.1
SQPNFLRF-amide
...
SQPNFLRF-amide [Caenorhabditis elegans]
175 aa protein
accession:NP_501592.1
Query: RecName: Full=FMRFamide-like neuropeptides; Contains: RecName: Full=Neuropeptide AF10; AltName: Full=GFGDEMSMPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF20; AltName: Full=GMPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF3; AltName: Full=AVPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF4; AltName: Full=GDVPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF13; AltName: Full=SDMPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF14; AltName: Full=SMPGVLRF-amide; Flags: Precursor
...
RecName: Full=FMRFamide-like neuropeptides; Contains: RecName: Full=Neuropeptide AF10; AltName: Full=GFGDEMSMPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF20; AltName: Full=GMPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF3; AltName: Full=AVPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF4; AltName: Full=GDVPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF13; AltName: Full=SDMPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF14; AltName: Full=SMPGVLRF-amide; Flags: Precursor [Ascaris suum]
161 aa protein
accession:P41854.1
SVPGVLRF-amide 3
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SVPGVLRF-amide 3 [Caenorhabditis elegans]
208 aa protein
accession:NP_508514.2
TPLGTMRF-amide
...
TPLGTMRF-amide [Caenorhabditis elegans]
184 aa protein
accession:NP_509694.1
DOMAINS: and other(s) domains
...
SQPNFLRF-amide [Caenorhabditis elegans]
142 aa protein
accession:NP_872078.1
SQPNFLRF-amide [Caenorhabditis elegans]
164 aa protein
accession:NP_872077.1
SQPNFLRF-amide [Caenorhabditis elegans]
175 aa protein
accession:NP_501592.1
RecName: Full=FMRFamide-like neuropeptides; Contains: RecName: Full=Neuropeptide AF10; AltName: Full=GFGDEMSMPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF20; AltName: Full=GMPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF3; AltName: Full=AVPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF4; AltName: Full=GDVPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF13; AltName: Full=SDMPGVLRF-amide; Contains: RecName: Full=Neuropeptide AF14; AltName: Full=SMPGVLRF-amide; Flags: Precursor [Ascaris suum]
161 aa protein
accession:P41854.1
SVPGVLRF-amide 3 [Caenorhabditis elegans]
208 aa protein
accession:NP_508514.2
TPLGTMRF-amide [Caenorhabditis elegans]
184 aa protein
accession:NP_509694.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
---|---|---|---|---|---|---|---|
1 | 96.7 | 311 | 63% | 3e-24 | 51.97% | NP_508514.2 | |
2 | 58.9 | 58.9 | 55% | 3e-10 | 39.80% | NP_872078.1 | |
3 | 56.2 | 56.2 | 44% | 3e-09 | 45.68% | NP_872077.1 | |
4 | 55.8 | 105 | 56% | 5e-09 | 45.68% | NP_501592.1 | |
5 | 54.7 | 109 | 95% | 2e-08 | 42.53% | NP_509694.1 |