Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
P85153.2
RecName: Full=Collagen alpha-1(II) chain; AltName: Full=Alpha-1 type II collagen [Mammut americanum]
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Query length:
669 aa
DOMAINS: and other(s) domains
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Query: RecName: Full=Collagen alpha-1(II) chain; AltName: Full=Alpha-1 type II collagen
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RecName: Full=Collagen alpha-1(II) chain; AltName: Full=Alpha-1 type II collagen [Mammut americanum]
669 aa protein
accession:P85153.2
collagen alpha-1(II) chain isoform 1 preproprotein
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collagen alpha-1(II) chain isoform 1 preproprotein [Mus musculus]
1487 aa protein
accession:NP_112440.2
collagen, type II, alpha 1b precursor
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collagen, type II, alpha 1b precursor [Danio rerio]
1493 aa protein
accession:NP_001268407.1
collagen, type II, alpha 1a precursor
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collagen, type II, alpha 1a precursor [Danio rerio]
1491 aa protein
accession:NP_571367.1
collagen alpha-1(II) chain isoform X1
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collagen alpha-1(II) chain isoform X1 [Danio rerio]
1421 aa protein
accession:XP_005166920.1
collagen alpha-1(II) chain isoform 2 precursor
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collagen alpha-1(II) chain isoform 2 precursor [Mus musculus]
1419 aa protein
accession:NP_001106987.2
DOMAINS: and other(s) domains
...
RecName: Full=Collagen alpha-1(II) chain; AltName: Full=Alpha-1 type II collagen [Mammut americanum]
669 aa protein
accession:P85153.2
collagen alpha-1(II) chain isoform 1 preproprotein [Mus musculus]
1487 aa protein
accession:NP_112440.2
collagen, type II, alpha 1b precursor [Danio rerio]
1493 aa protein
accession:NP_001268407.1
collagen, type II, alpha 1a precursor [Danio rerio]
1491 aa protein
accession:NP_571367.1
collagen alpha-1(II) chain isoform X1 [Danio rerio]
1421 aa protein
accession:XP_005166920.1
collagen alpha-1(II) chain isoform 2 precursor [Mus musculus]
1419 aa protein
accession:NP_001106987.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 53.9 | 53.9 | 4% | 5e-06 | 100.00% | NP_112440.2 | |
| 2 | 48.5 | 48.5 | 4% | 2e-04 | 89.66% | NP_001268407.1 | |
| 3 | 53.9 | 53.9 | 4% | 6e-06 | 100.00% | NP_001106987.2 | |
| 4 | 47.0 | 47.0 | 4% | 8e-04 | 86.67% | NP_571367.1 | |
| 5 | 46.6 | 46.6 | 4% | 9e-04 | 86.67% | XP_005166920.1 |