Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: UXB53811.1 RNA polymerase alpha subunit [Campanula herminii] ... Query length: 337 aa

DNA-directed RNA polymerase subunit alpha ...

DNA-directed RNA polymerase subunit alpha [Microcystis]

313 aa protein

accession:WP_002796019.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit alpha ...

DNA-directed RNA polymerase subunit alpha [Synechocystis]

314 aa protein

accession:WP_190596096.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit alpha ...

DNA-directed RNA polymerase subunit alpha [Clostridioides]

315 aa protein

accession:WP_003427733.1

Alignment Sequence Identical proteins

Query: RNA polymerase alpha subunit ...

RNA polymerase alpha subunit [Campanula herminii]

337 aa protein

accession:UXB53811.1

Sequence Identical proteins

RNA polymerase alpha subunit ...

RNA polymerase alpha subunit [Glycine max]

333 aa protein

accession:YP_538797.1

Alignment Sequence Identical proteins

RNA polymerase alpha subunit ...

RNA polymerase alpha subunit [Arabidopsis thaliana]

329 aa protein

accession:NP_051090.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|YP_538797.1\|	RNA polymerase alpha subunit [Glycine max]	528	528	96%	0.0	79.20%	YP_538797.1
2 Select seq ref\|NP_051090.1\|	RNA polymerase alpha subunit [Arabidopsis thaliana]	514	514	96%	0.0	75.38%	NP_051090.1
3 Select seq ref\|WP_002796019.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit alpha [Microcystis]	206	206	96%	5e-63	35.47%	WP_002796019.1
4 Select seq ref\|WP_190596096.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit alpha [Synechocystis]	204	204	96%	3e-62	37.00%	WP_190596096.1
5 Select seq ref\|WP_003427733.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit alpha [Clostridioides]	163	163	89%	2e-46	32.46%	WP_003427733.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments