Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XCN25952.1 RNA polymerase subunit beta [Euonymus nanus] ... Query length: 1390 aa

DNA-directed RNA polymerase subunit beta'' ...

DNA-directed RNA polymerase subunit beta'' [Synechocystis salina]

1317 aa protein

accession:WP_194019160.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta' ...

DNA-directed RNA polymerase subunit beta' [Microcystis aeruginosa]

1334 aa protein

accession:WP_061430916.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta' ...

DNA-directed RNA polymerase subunit beta' [Bacillus]

1199 aa protein

accession:WP_004399688.1

Alignment Sequence Identical proteins

Query: RNA polymerase subunit beta ...

RNA polymerase subunit beta [Euonymus nanus]

1390 aa protein

accession:XCN25952.1

Sequence Identical proteins

RNA polymerase beta'' subunit ...

RNA polymerase beta'' subunit [Glycine max]

1386 aa protein

accession:YP_538765.1

Alignment Sequence Identical proteins

RNA polymerase beta'' subunit ...

RNA polymerase beta'' subunit [Arabidopsis thaliana]

1376 aa protein

accession:NP_051049.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_051049.1\|	RNA polymerase beta'' subunit [Arabidopsis thaliana]	1030	1800	89%	0.0	80.67%	NP_051049.1
2 Select seq ref\|YP_538765.1\|	RNA polymerase beta'' subunit [Glycine max]	989	1758	89%	0.0	78.03%	YP_538765.1
3 Select seq ref\|WP_194019160.1\|	DNA-directed RNA polymerase subunit beta'' [Synechocystis salina]	390	563	56%	9e-113	42.55%	WP_194019160.1
4 Select seq ref\|WP_061430916.1\|	DNA-directed RNA polymerase subunit beta' [Microcystis aeruginosa]	381	598	53%	1e-109	41.12%	WP_061430916.1
5 Select seq ref\|WP_004399688.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit beta' [Bacillus]	270	394	39%	1e-72	41.21%	WP_004399688.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments