Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_006507950.1
DNA-directed RNA polymerase III subunit RPC5 isoform X4 [Mus musculus]
...
Query length:
599 aa
DOMAINS: and other(s) domains
...
SIN-like family protein
...
SIN-like family protein [Arabidopsis thaliana]
689 aa protein
accession:NP_199764.1
RNA polymerase III subunit E, isoform A
...
RNA polymerase III subunit E, isoform A [Drosophila melanogaster]
486 aa protein
accession:NP_524192.2
DNA-directed RNA polymerase III subunit RPC5 isoform X1
...
DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Danio rerio]
696 aa protein
accession:XP_005169485.1
DNA-directed RNA polymerase III subunit RPC5 isoform 1
...
DNA-directed RNA polymerase III subunit RPC5 isoform 1 [Homo sapiens]
708 aa protein
accession:NP_060589.1
Query: DNA-directed RNA polymerase III subunit RPC5 isoform X4
...
DNA-directed RNA polymerase III subunit RPC5 isoform X4 [Mus musculus]
599 aa protein
accession:XP_006507950.1
DNA-directed RNA polymerase III subunit RPC5 isoform 3
...
DNA-directed RNA polymerase III subunit RPC5 isoform 3 [Mus musculus]
714 aa protein
accession:NP_001366217.1
DOMAINS: and other(s) domains
...
SIN-like family protein [Arabidopsis thaliana]
689 aa protein
accession:NP_199764.1
RNA polymerase III subunit E, isoform A [Drosophila melanogaster]
486 aa protein
accession:NP_524192.2
DNA-directed RNA polymerase III subunit RPC5 isoform X1 [Danio rerio]
696 aa protein
accession:XP_005169485.1
DNA-directed RNA polymerase III subunit RPC5 isoform 1 [Homo sapiens]
708 aa protein
accession:NP_060589.1
DNA-directed RNA polymerase III subunit RPC5 isoform X4 [Mus musculus]
599 aa protein
accession:XP_006507950.1
DNA-directed RNA polymerase III subunit RPC5 isoform 3 [Mus musculus]
714 aa protein
accession:NP_001366217.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
Select:AllNone
Selected:0
Alignments
Download
GenPept
Graphics
Distance tree of results
Multiple alignment
Show/hide columns of the table presenting best hits
Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1233 | 1233 | 99% | 0.0 | 99.50% | NP_001366217.1 | |
| 2 | 1077 | 1077 | 99% | 0.0 | 89.28% | NP_060589.1 | |
| 3 | 788 | 788 | 98% | 0.0 | 65.38% | XP_005169485.1 | |
| 4 | 172 | 172 | 51% | 7e-46 | 32.30% | NP_524192.2 | |
| 5 | 86.7 | 86.7 | 52% | 2e-16 | 24.61% | NP_199764.1 |