Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_006508335.1
pre-mRNA cleavage complex 2 protein Pcf11 isoform X1 [Mus musculus]
...
Query length:
1684 aa
DOMAINS: and other(s) domains
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Pcf11 cleavage and polyadenylation factor subunit, isoform B
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Pcf11 cleavage and polyadenylation factor subunit, isoform B [Drosophila melanogaster]
573 aa protein
accession:NP_001163153.1
CID domain-containing protein
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CID domain-containing protein [Caenorhabditis elegans]
285 aa protein
accession:NP_001367577.1
pre-mRNA cleavage complex 2 protein Pcf11
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pre-mRNA cleavage complex 2 protein Pcf11 [Danio rerio]
1457 aa protein
accession:NP_001007308.1
pre-mRNA cleavage complex 2 protein Pcf11
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pre-mRNA cleavage complex 2 protein Pcf11 [Mus musculus]
1553 aa protein
accession:NP_083354.3
Query: pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
...
pre-mRNA cleavage complex 2 protein Pcf11 isoform X1 [Mus musculus]
1684 aa protein
accession:XP_006508335.1
pre-mRNA cleavage complex 2 protein Pcf11 isoform 1
...
pre-mRNA cleavage complex 2 protein Pcf11 isoform 1 [Homo sapiens]
1686 aa protein
accession:NP_001333342.1
DOMAINS: and other(s) domains
...
Pcf11 cleavage and polyadenylation factor subunit, isoform B [Drosophila melanogaster]
573 aa protein
accession:NP_001163153.1
CID domain-containing protein [Caenorhabditis elegans]
285 aa protein
accession:NP_001367577.1
pre-mRNA cleavage complex 2 protein Pcf11 [Danio rerio]
1457 aa protein
accession:NP_001007308.1
pre-mRNA cleavage complex 2 protein Pcf11 [Mus musculus]
1553 aa protein
accession:NP_083354.3
pre-mRNA cleavage complex 2 protein Pcf11 isoform X1 [Mus musculus]
1684 aa protein
accession:XP_006508335.1
pre-mRNA cleavage complex 2 protein Pcf11 isoform 1 [Homo sapiens]
1686 aa protein
accession:NP_001333342.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 3035 | 3035 | 100% | 0.0 | 93.73% | NP_001333342.1 | |
| 2 | 1806 | 3182 | 92% | 0.0 | 99.88% | NP_083354.3 | |
| 3 | 611 | 1019 | 97% | 0.0 | 39.77% | NP_001007308.1 | |
| 4 | 163 | 163 | 12% | 2e-40 | 42.53% | NP_001163153.1 | |
| 5 | 113 | 113 | 10% | 5e-26 | 36.32% | NP_001367577.1 |