Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_006521249.1
pre-mRNA-processing factor 40 homolog B isoform X14 [Mus musculus]
...
Query length:
874 aa
DOMAINS: and other(s) domains
...
pre-mRNA-processing factor 40 homolog A isoform 12
...
pre-mRNA-processing factor 40 homolog A isoform 12 [Homo sapiens]
856 aa protein
accession:NP_001352533.1
pre-mRNA-processing factor 40 homolog B isoform 3
...
pre-mRNA-processing factor 40 homolog B isoform 3 [Mus musculus]
896 aa protein
accession:NP_001357561.1
pre-mRNA-processing factor 40 homolog B isoform X1
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pre-mRNA-processing factor 40 homolog B isoform X1 [Mus musculus]
903 aa protein
accession:XP_011243999.1
pre-mRNA-processing factor 40 homolog B isoform 4
...
pre-mRNA-processing factor 40 homolog B isoform 4 [Mus musculus]
895 aa protein
accession:NP_001357562.1
Query: pre-mRNA-processing factor 40 homolog B isoform X14
...
pre-mRNA-processing factor 40 homolog B isoform X14 [Mus musculus]
874 aa protein
accession:XP_006521249.1
pre-mRNA-processing factor 40 homolog B isoform 2
...
pre-mRNA-processing factor 40 homolog B isoform 2 [Mus musculus]
873 aa protein
accession:NP_061256.1
DOMAINS: and other(s) domains
...
pre-mRNA-processing factor 40 homolog A isoform 12 [Homo sapiens]
856 aa protein
accession:NP_001352533.1
pre-mRNA-processing factor 40 homolog B isoform 3 [Mus musculus]
896 aa protein
accession:NP_001357561.1
pre-mRNA-processing factor 40 homolog B isoform X1 [Mus musculus]
903 aa protein
accession:XP_011243999.1
pre-mRNA-processing factor 40 homolog B isoform 4 [Mus musculus]
895 aa protein
accession:NP_001357562.1
pre-mRNA-processing factor 40 homolog B isoform X14 [Mus musculus]
874 aa protein
accession:XP_006521249.1
pre-mRNA-processing factor 40 homolog B isoform 2 [Mus musculus]
873 aa protein
accession:NP_061256.1
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1777 | 1777 | 100% | 0.0 | 100.00% | NP_001357561.1 | |
| 2 | 749 | 749 | 74% | 0.0 | 56.80% | NP_001352533.1 | |
| 3 | 1776 | 1776 | 100% | 0.0 | 100.00% | XP_011243999.1 | |
| 4 | 1772 | 1772 | 100% | 0.0 | 99.89% | NP_061256.1 | |
| 5 | 1771 | 1771 | 100% | 0.0 | 99.89% | NP_001357562.1 |