Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_006528549.1 claudin-2 isoform X1 [Mus musculus] ... Query length: 254 aa

claudin-2 ...

claudin-2 [Danio rerio]

270 aa protein

accession:NP_001004559.2

Alignment Sequence Identical proteins

claudin-14 ...

claudin-14 [Homo sapiens]

239 aa protein

accession:NP_001139549.1

Alignment Sequence Identical proteins

claudin-14 ...

claudin-14 [Mus musculus]

239 aa protein

accession:NP_001159397.1

Alignment Sequence Identical proteins

claudin-2 ...

claudin-2 [Homo sapiens]

230 aa protein

accession:NP_001164563.1

Alignment Sequence Identical proteins

Query: claudin-2 isoform X1 ...

claudin-2 isoform X1 [Mus musculus]

254 aa protein

accession:XP_006528549.1

Sequence Identical proteins

claudin-2 ...

claudin-2 [Mus musculus]

230 aa protein

accession:NP_001397350.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001397350.1\|	claudin-2 [Mus musculus]	464	464	89%	3e-167	100.00%	NP_001397350.1
2 Select seq ref\|NP_001164563.1\|	claudin-2 [Homo sapiens]	399	399	89%	1e-141	91.23%	NP_001164563.1
3 Select seq ref\|NP_001004559.2\|	claudin-2 [Danio rerio]	191	191	66%	8e-59	55.36%	NP_001004559.2
4 Select seq ref\|NP_001139549.1\|	claudin-14 [Homo sapiens]	200	200	79%	7e-63	50.00%	NP_001139549.1
5 Select seq ref\|NP_001159397.1\|	claudin-14 [Mus musculus]	177	177	76%	3e-54	50.52%	NP_001159397.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments