Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_011244188.1 claudin domain-containing protein 1 isoform X1 [Mus musculus] ... Query length: 207 aa

sinuous ...

sinuous [Drosophila melanogaster]

247 aa protein

accession:NP_647971.3

Alignment Sequence Identical proteins

claudin domain-containing protein 1b ...

claudin domain-containing protein 1b [Danio rerio]

253 aa protein

accession:NP_001155069.1

Alignment Sequence Identical proteins

Query: claudin domain-containing protein 1 isoform X1 ...

claudin domain-containing protein 1 isoform X1 [Mus musculus]

207 aa protein

accession:XP_011244188.1

Sequence Identical proteins

claudin domain-containing protein 1 isoform b ...

claudin domain-containing protein 1 isoform b [Homo sapiens]

276 aa protein

accession:NP_001035272.1

Alignment Sequence Identical proteins

claudin domain-containing protein 1 isoform 3 ...

claudin domain-containing protein 1 isoform 3 [Mus musculus]

230 aa protein

accession:NP_001239380.1

Alignment Sequence Identical proteins

claudin domain-containing protein 1 isoform 1 ...

claudin domain-containing protein 1 isoform 1 [Mus musculus]

253 aa protein

accession:NP_001343417.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001239380.1\|	claudin domain-containing protein 1 isoform 3 [Mus musculus]	438	438	100%	8e-158	100.00%	NP_001239380.1
2 Select seq ref\|NP_001035272.1\|	claudin domain-containing protein 1 isoform b [Homo sapiens]	378	378	100%	2e-133	73.52%	NP_001035272.1
3 Select seq ref\|NP_001155069.1\|	claudin domain-containing protein 1b [Danio rerio]	189	189	100%	2e-59	40.47%	NP_001155069.1
4 Select seq ref\|NP_647971.3\|	sinuous [Drosophila melanogaster]	39.7	39.7	21%	0.010	40.00%	NP_647971.3
5 Select seq ref\|NP_001343417.1\|	claudin domain-containing protein 1 isoform 1 [Mus musculus]	410	410	100%	3e-146	81.42%	NP_001343417.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments