Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_025455451.1
PAB-dependent poly(A)-specific ribonuclease subunit pan3 [Aspergillus niger CBS 101883]
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Query length:
664 aa
DOMAINS: and other(s) domains
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PAN complex subunit Ppk26
...
PAN complex subunit Ppk26 [Schizosaccharomyces pombe]
589 aa protein
accession:NP_596134.1
Query: PAB-dependent poly(A)-specific ribonuclease subunit pan3
...
PAB-dependent poly(A)-specific ribonuclease subunit pan3 [Aspergillus niger CBS 101883]
664 aa protein
accession:XP_025455451.1
PAN2-PAN3 deadenylation complex subunit Pan3 isoform X11
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PAN2-PAN3 deadenylation complex subunit Pan3 isoform X11 [Mus musculus]
557 aa protein
accession:XP_006504941.1
PAN2-PAN3 deadenylation complex subunit PAN3
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PAN2-PAN3 deadenylation complex subunit PAN3 [Danio rerio]
799 aa protein
accession:NP_001099162.2
Poly(A) specific ribonuclease subunit PAN3, isoform O
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Poly(A) specific ribonuclease subunit PAN3, isoform O [Drosophila melanogaster]
749 aa protein
accession:NP_001097486.1
PAN2-PAN3 deadenylation complex subunit PAN3
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PAN2-PAN3 deadenylation complex subunit PAN3 [Caenorhabditis elegans]
632 aa protein
accession:NP_499177.3
DOMAINS: and other(s) domains
...
PAN complex subunit Ppk26 [Schizosaccharomyces pombe]
589 aa protein
accession:NP_596134.1
PAB-dependent poly(A)-specific ribonuclease subunit pan3 [Aspergillus niger CBS 101883]
664 aa protein
accession:XP_025455451.1
PAN2-PAN3 deadenylation complex subunit Pan3 isoform X11 [Mus musculus]
557 aa protein
accession:XP_006504941.1
PAN2-PAN3 deadenylation complex subunit PAN3 [Danio rerio]
799 aa protein
accession:NP_001099162.2
Poly(A) specific ribonuclease subunit PAN3, isoform O [Drosophila melanogaster]
749 aa protein
accession:NP_001097486.1
PAN2-PAN3 deadenylation complex subunit PAN3 [Caenorhabditis elegans]
632 aa protein
accession:NP_499177.3
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
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Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
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1 | 335 | 335 | 69% | 1e-105 | 36.20% | XP_006504941.1 | |
2 | 333 | 333 | 69% | 1e-102 | 36.48% | NP_001099162.2 | |
3 | 298 | 298 | 71% | 1e-89 | 33.85% | NP_001097486.1 | |
4 | 268 | 268 | 95% | 5e-80 | 28.39% | NP_596134.1 | |
5 | 263 | 263 | 57% | 8e-78 | 38.27% | NP_499177.3 |