Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_033858969.1 splicing factor 3B subunit 6 [Acipenser ruthenus] ... Query length: 125 aa

RNA recognition motif-containing protein RRM ...

RNA recognition motif-containing protein RRM [Dictyostelium discoideum AX4]

117 aa protein

accession:XP_637842.1

Alignment Sequence Identical proteins

splicing factor 3B subunit 6-like protein ...

splicing factor 3B subunit 6-like protein [Glycine max]

124 aa protein

accession:XP_003545423.1

Alignment Sequence Identical proteins

RNA-binding (RRM/RBD/RNP motifs) family protein ...

RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]

124 aa protein

accession:NP_196780.1

Alignment Sequence Identical proteins

splicing factor 3b subunit 6 ...

splicing factor 3b subunit 6 [Drosophila melanogaster]

121 aa protein

accession:NP_648037.1

Alignment Sequence Identical proteins

Query: splicing factor 3B subunit 6 ...

splicing factor 3B subunit 6 [Acipenser ruthenus]

125 aa protein

accession:XP_033858969.1

Sequence Identical proteins

splicing factor 3B subunit 6 ...

splicing factor 3B subunit 6 [Danio rerio]

125 aa protein

accession:NP_001002067.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_001002067.1\|	splicing factor 3B subunit 6 [Danio rerio]	258	258	100%	2e-89	99.20%	NP_001002067.1
2 Select seq ref\|NP_648037.1\|	splicing factor 3b subunit 6 [Drosophila melanogaster]	194	194	92%	3e-64	76.52%	NP_648037.1
3 Select seq ref\|XP_003545423.1\|	splicing factor 3B subunit 6-like protein [Glycine max]	175	175	96%	1e-56	62.81%	XP_003545423.1
4 Select seq ref\|NP_196780.1\|	RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]	171	171	96%	3e-55	62.81%	NP_196780.1
5 Select seq ref\|XP_637842.1\|	RNA recognition motif-containing protein RRM [Dictyostelium discoideum AX4]	156	156	93%	2e-49	61.54%	XP_637842.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments