Summary [?]
A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".
Query:
XP_052021788.1
CCR4-NOT transcription complex subunit 2 isoform X4 [Apodemus sylvaticus]
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Query length:
509 aa
DOMAINS: and other(s) domains
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probable NOT transcription complex subunit VIP2 isoform X2
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probable NOT transcription complex subunit VIP2 isoform X2 [Glycine max]
647 aa protein
accession:XP_003538029.1
NOT2/NOT3/NOT5 C-terminal domain-containing protein
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NOT2/NOT3/NOT5 C-terminal domain-containing protein [Caenorhabditis elegans]
444 aa protein
accession:NP_494772.1
regena, isoform C
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regena, isoform C [Drosophila melanogaster]
579 aa protein
accession:NP_001287183.1
CCR4-NOT transcription complex subunit 2 isoform X1
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CCR4-NOT transcription complex subunit 2 isoform X1 [Danio rerio]
530 aa protein
accession:XP_005163166.1
Query: CCR4-NOT transcription complex subunit 2 isoform X4
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CCR4-NOT transcription complex subunit 2 isoform X4 [Apodemus sylvaticus]
509 aa protein
accession:XP_052021788.1
CCR4-NOT transcription complex subunit 2 isoform d
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CCR4-NOT transcription complex subunit 2 isoform d [Mus musculus]
550 aa protein
accession:NP_001032936.2
DOMAINS: and other(s) domains
...
probable NOT transcription complex subunit VIP2 isoform X2 [Glycine max]
647 aa protein
accession:XP_003538029.1
NOT2/NOT3/NOT5 C-terminal domain-containing protein [Caenorhabditis elegans]
444 aa protein
accession:NP_494772.1
regena, isoform C [Drosophila melanogaster]
579 aa protein
accession:NP_001287183.1
CCR4-NOT transcription complex subunit 2 isoform X1 [Danio rerio]
530 aa protein
accession:XP_005163166.1
CCR4-NOT transcription complex subunit 2 isoform X4 [Apodemus sylvaticus]
509 aa protein
accession:XP_052021788.1
CCR4-NOT transcription complex subunit 2 isoform d [Mus musculus]
550 aa protein
accession:NP_001032936.2
See full multiple alignment
Legend
Query sequence
nr matches
Landmark matches
Not aligned to query
Gap
Descriptions
Best hits
Show all columns of the table presenting best hits producing significant alignments
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Selected:0
Alignments
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GenPept
Graphics
Distance tree of results
Multiple alignment
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Available columns
| Select for downloading or viewing reports | Description | Max score | Total score | Query cover | E value | Ident | Accession |
|---|---|---|---|---|---|---|---|
| 1 | 1034 | 1034 | 100% | 0.0 | 92.55% | NP_001032936.2 | |
| 2 | 878 | 878 | 93% | 0.0 | 88.87% | XP_005163166.1 | |
| 3 | 259 | 315 | 54% | 2e-78 | 54.81% | NP_001287183.1 | |
| 4 | 211 | 211 | 61% | 1e-61 | 40.41% | NP_494772.1 | |
| 5 | 166 | 211 | 57% | 2e-43 | 48.59% | XP_003538029.1 |