Smart BLAST

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XP_054500393.1 CCAAT/enhancer-binding protein beta [Agelaius phoeniceus] ... Query length: 324 aa

slow border cells, isoform B ...

slow border cells, isoform B [Drosophila melanogaster]

449 aa protein

accession:NP_001286836.1

Alignment Sequence Identical proteins

CCAAT/enhancer-binding protein homolog 2 ...

CCAAT/enhancer-binding protein homolog 2 [Caenorhabditis elegans]

100 aa protein

accession:NP_871835.1

Alignment Sequence Identical proteins

CCAAT/enhancer-binding protein beta ...

CCAAT/enhancer-binding protein beta [Danio rerio]

280 aa protein

accession:NP_571959.2

Alignment Sequence Identical proteins

Query: CCAAT/enhancer-binding protein beta ...

CCAAT/enhancer-binding protein beta [Agelaius phoeniceus]

324 aa protein

accession:XP_054500393.1

Sequence Identical proteins

CCAAT/enhancer-binding protein beta isoform a ...

CCAAT/enhancer-binding protein beta isoform a [Homo sapiens]

345 aa protein

accession:NP_005185.2

Alignment Sequence Identical proteins

CCAAT/enhancer-binding protein beta isoform a ...

CCAAT/enhancer-binding protein beta isoform a [Mus musculus]

296 aa protein

accession:NP_034013.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_005185.2\|	CCAAT/enhancer-binding protein beta isoform a [Homo sapiens]	273	273	100%	6e-89	58.45%	NP_005185.2
2 Select seq ref\|NP_034013.1\|	CCAAT/enhancer-binding protein beta isoform a [Mus musculus]	212	212	100%	5e-66	57.85%	NP_034013.1
3 Select seq ref\|NP_571959.2\|	CCAAT/enhancer-binding protein beta [Danio rerio]	177	177	89%	1e-52	45.57%	NP_571959.2
4 Select seq ref\|NP_871835.1\|	CCAAT/enhancer-binding protein homolog 2 [Caenorhabditis elegans]	58.5	58.5	18%	9e-10	48.33%	NP_871835.1
5 Select seq ref\|NP_001286836.1\|	slow border cells, isoform B [Drosophila melanogaster]	58.2	58.2	21%	4e-08	47.14%	NP_001286836.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments