Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: XSG13868.1 photosystem II protein D1 [Alatocladia cf. modesta] ... Query length: 317 aa

photosystem II D2 protein (photosystem q(a) protein) ...

photosystem II D2 protein (photosystem q(a) protein) [Microcystis aeruginosa]

349 aa protein

accession:WP_061432924.1

Alignment Sequence Identical proteins

photosystem II q(b) protein ...

photosystem II q(b) protein [Synechocystis]

360 aa protein

accession:WP_194020093.1

Alignment Sequence Identical proteins

photosystem II q(b) protein ...

photosystem II q(b) protein [Microcystis]

360 aa protein

accession:WP_012264511.1

Alignment Sequence Identical proteins

Query: photosystem II protein D1 ...

photosystem II protein D1 [Alatocladia cf. modesta]

317 aa protein

accession:XSG13868.1

Sequence Identical proteins

photosystem II protein D1 ...

photosystem II protein D1 [Arabidopsis thaliana]

353 aa protein

accession:NP_051039.1

Alignment Sequence Identical proteins

photosystem II protein D1 ...

photosystem II protein D1 [Glycine max]

353 aa protein

accession:YP_538745.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_051039.1\|	photosystem II protein D1 [Arabidopsis thaliana]	605	605	100%	0.0	91.48%	NP_051039.1
2 Select seq ref\|YP_538745.1\|	photosystem II protein D1 [Glycine max]	605	605	100%	0.0	91.48%	YP_538745.1
3 Select seq ref\|WP_194020093.1\|	MULTISPECIES: photosystem II q(b) protein [Synechocystis]	588	588	100%	0.0	87.07%	WP_194020093.1
4 Select seq ref\|WP_012264511.1\|	MULTISPECIES: photosystem II q(b) protein [Microcystis]	587	587	100%	0.0	88.29%	WP_012264511.1
5 Select seq ref\|WP_061432924.1\|	photosystem II D2 protein (photosystem q(a) protein) [Microcystis aeruginosa]	155	155	91%	3e-43	32.76%	WP_061432924.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments