Smart BLAST

Report description

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: YP_009546007.1 photosystem II protein W [Glaucocystis incrassata] ... Query length: 115 aa

photosystem II reaction center PSB28 protein ...

photosystem II reaction center PSB28 protein [Arabidopsis thaliana]

183 aa protein

accession:NP_567814.1

Alignment Sequence Identical proteins

photosystem II reaction center PSB28 protein, chloroplastic ...

photosystem II reaction center PSB28 protein, chloroplastic [Glycine max]

179 aa protein

accession:XP_003537110.1

Alignment Sequence Identical proteins

photosystem II reaction center PSB28-like ...

photosystem II reaction center PSB28-like [Glycine max]

179 aa protein

accession:NP_001235805.1

Alignment Sequence Identical proteins

Query: photosystem II protein W ...

photosystem II protein W [Glaucocystis incrassata]

115 aa protein

accession:YP_009546007.1

Sequence Identical proteins

photosystem II reaction center protein Psb28 ...

photosystem II reaction center protein Psb28 [Synechocystis]

112 aa protein

accession:WP_010871246.1

Alignment Sequence Identical proteins

photosystem II reaction center protein Psb28 ...

photosystem II reaction center protein Psb28 [Microcystis]

112 aa protein

accession:WP_024969397.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|WP_010871246.1\|	MULTISPECIES: photosystem II reaction center protein Psb28 [Synechocystis]	137	137	98%	5e-42	55.75%	WP_010871246.1
2 Select seq ref\|WP_024969397.1\|	MULTISPECIES: photosystem II reaction center protein Psb28 [Microcystis]	134	134	99%	1e-40	55.26%	WP_024969397.1
3 Select seq ref\|XP_003537110.1\|	photosystem II reaction center PSB28 protein, chloroplastic [Glycine max]	134	134	96%	6e-40	59.09%	XP_003537110.1
4 Select seq ref\|NP_567814.1\|	photosystem II reaction center PSB28 protein [Arabidopsis thaliana]	132	132	95%	7e-39	56.88%	NP_567814.1
5 Select seq ref\|NP_001235805.1\|	photosystem II reaction center PSB28-like [Glycine max]	134	134	96%	1e-39	59.09%	NP_001235805.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments