Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: YP_009555721.1 RNA polymerase subunit beta' [Selaginella kraussiana] ... Query length: 694 aa

Query: RNA polymerase subunit beta' ...

RNA polymerase subunit beta' [Selaginella kraussiana]

694 aa protein

accession:YP_009555721.1

Sequence Identical proteins

RNA polymerase beta' subunit ...

RNA polymerase beta' subunit [Arabidopsis thaliana]

680 aa protein

accession:NP_051050.1

Alignment Sequence Identical proteins

RNA polymerase beta' subunit ...

RNA polymerase beta' subunit [Glycine max]

687 aa protein

accession:YP_538764.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit gamma ...

DNA-directed RNA polymerase subunit gamma [Microcystis]

626 aa protein

accession:WP_004163413.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit gamma ...

DNA-directed RNA polymerase subunit gamma [Synechocystis]

626 aa protein

accession:WP_190596344.1

Alignment Sequence Identical proteins

DNA-directed RNA polymerase subunit beta' ...

DNA-directed RNA polymerase subunit beta' [Gammaproteobacteria]

1399 aa protein

accession:WP_003093745.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_051050.1\|	RNA polymerase beta' subunit [Arabidopsis thaliana]	668	668	97%	0.0	50.66%	NP_051050.1
2 Select seq ref\|YP_538764.1\|	RNA polymerase beta' subunit [Glycine max]	658	658	97%	0.0	49.35%	YP_538764.1
3 Select seq ref\|WP_004163413.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit gamma [Microcystis]	487	487	97%	2e-163	42.62%	WP_004163413.1
4 Select seq ref\|WP_190596344.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit gamma [Synechocystis]	481	481	96%	4e-161	42.18%	WP_190596344.1
5 Select seq ref\|WP_003093745.1\|	MULTISPECIES: DNA-directed RNA polymerase subunit beta' [Gammaproteobacteria]	451	451	78%	3e-141	44.92%	WP_003093745.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments