Smart BLAST

Report description

Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: YP_009555723.1 cytochrome b6/f subunit N [Selaginella kraussiana] ... Query length: 30 aa

cytochrome b6/f complex subunit VIII ...

cytochrome b6/f complex subunit VIII [Selaginella uncinata]

30 aa protein

accession:YP_009584226.1

Alignment Sequence Identical proteins

cytochrome b/f complex subunit VIII ...

cytochrome b/f complex subunit VIII [Takakia lepidozioides]

32 aa protein

accession:YP_009193399.1

Alignment Sequence Identical proteins

hypothetical chloroplast RF61 ...

hypothetical chloroplast RF61 [Isoetes flaccida]

29 aa protein

accession:YP_004021274.1

Alignment Sequence Identical proteins

putative chloroplast RF61 ...

putative chloroplast RF61 [Isoetes japonica]

31 aa protein

accession:YP_010206092.1

Alignment Sequence Identical proteins

Query: cytochrome b6/f subunit N ...

cytochrome b6/f subunit N [Selaginella kraussiana]

30 aa protein

accession:YP_009555723.1

Sequence Identical proteins

cytochrome b6/f complex subunit VIII ...

cytochrome b6/f complex subunit VIII [Megaloselaginella exaltata]

29 aa protein

accession:QQP17264.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq gb\|QQP17264.1\|	cytochrome b6/f complex subunit VIII [Megaloselaginella exaltata]	49.3	49.3	93%	2e-06	85.71%	QQP17264.1
2 Select seq ref\|YP_009193399.1\|	cytochrome b/f complex subunit VIII [Takakia lepidozioides]	47.0	47.0	100%	2e-05	76.67%	YP_009193399.1
3 Select seq ref\|YP_004021274.1\|	hypothetical chloroplast RF61 [Isoetes flaccida]	47.0	47.0	97%	2e-05	79.31%	YP_004021274.1
4 Select seq ref\|YP_010206092.1\|	putative chloroplast RF61 [Isoetes japonica]	45.1	45.1	93%	1e-04	78.57%	YP_010206092.1
5 Select seq ref\|YP_009584226.1\|	cytochrome b6/f complex subunit VIII [Selaginella uncinata]	44.7	44.7	100%	1e-04	76.67%	YP_009584226.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments