Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: YP_009705279.1 photosystem II CP43 chlorophyll apoprotein [Bassecoia hookeri] ... Query length: 473 aa

chlorophyll a/b binding light-harvesting protein ...

chlorophyll a/b binding light-harvesting protein [Synechocystis salina]

342 aa protein

accession:WP_194019219.1

Alignment Sequence Identical proteins

photosystem II reaction center protein CP43 ...

photosystem II reaction center protein CP43 [Synechocystis]

460 aa protein

accession:WP_014407100.1

Alignment Sequence Identical proteins

photosystem II reaction center protein CP43 ...

photosystem II reaction center protein CP43 [Microcystis]

460 aa protein

accession:WP_061433070.1

Alignment Sequence Identical proteins

photosystem II 44 kDa protein ...

photosystem II 44 kDa protein [Glycine max]

473 aa protein

accession:YP_538759.1

Alignment Sequence Identical proteins

Query: photosystem II CP43 chlorophyll apoprotein ...

photosystem II CP43 chlorophyll apoprotein [Bassecoia hookeri]

473 aa protein

accession:YP_009705279.1

Sequence Identical proteins

photosystem II 44 kDa protein ...

photosystem II 44 kDa protein [Arabidopsis thaliana]

473 aa protein

accession:NP_051055.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|YP_538759.1\|	photosystem II 44 kDa protein [Glycine max]	941	941	100%	0.0	98.52%	YP_538759.1
2 Select seq ref\|NP_051055.1\|	photosystem II 44 kDa protein [Arabidopsis thaliana]	939	939	100%	0.0	98.10%	NP_051055.1
3 Select seq ref\|WP_014407100.1\|	MULTISPECIES: photosystem II reaction center protein CP43 [Synechocystis]	751	751	97%	0.0	81.40%	WP_014407100.1
4 Select seq ref\|WP_061433070.1\|	MULTISPECIES: photosystem II reaction center protein CP43 [Microcystis]	730	730	95%	0.0	82.18%	WP_061433070.1
5 Select seq ref\|WP_194019219.1\|	chlorophyll a/b binding light-harvesting protein [Synechocystis salina]	252	252	59%	8e-79	49.29%	WP_194019219.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments