Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: YP_010587936.1 photosystem II subunit M [Isoetes aequinoctialis] ... Query length: 34 aa

photosystem II reaction center protein PsbM ...

photosystem II reaction center protein PsbM [Synechocystis]

35 aa protein

accession:WP_010871338.1

Alignment Sequence Identical proteins

photosystem II reaction center protein PsbM ...

photosystem II reaction center protein PsbM [Microcystis]

35 aa protein

accession:WP_002745897.1

Alignment Sequence Identical proteins

photosystem II protein M ...

photosystem II protein M [Glycine max]

34 aa protein

accession:YP_538761.1

Alignment Sequence Identical proteins

photosystem II protein M ...

photosystem II protein M [Arabidopsis thaliana]

34 aa protein

accession:NP_051053.1

Alignment Sequence Identical proteins

Query: photosystem II subunit M ...

photosystem II subunit M [Isoetes aequinoctialis]

34 aa protein

accession:YP_010587936.1

Sequence Identical proteins

photosystem II protein M ...

photosystem II protein M [Isoetes butleri]

34 aa protein

accession:AYM34020.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq gb\|AYM34020.1\|	photosystem II protein M [Isoetes butleri]	66.2	66.2	100%	6e-13	97.06%	AYM34020.1
2 Select seq ref\|YP_538761.1\|	photosystem II protein M [Glycine max]	55.5	55.5	100%	8e-12	82.35%	YP_538761.1
3 Select seq ref\|NP_051053.1\|	photosystem II protein M [Arabidopsis thaliana]	53.9	53.9	100%	3e-11	79.41%	NP_051053.1
4 Select seq ref\|WP_010871338.1\|	MULTISPECIES: photosystem II reaction center protein PsbM [Synechocystis]	38.9	38.9	97%	3e-05	51.52%	WP_010871338.1
5 Select seq ref\|WP_002745897.1\|	MULTISPECIES: photosystem II reaction center protein PsbM [Microcystis]	35.8	35.8	100%	5e-04	44.12%	WP_002745897.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments