Smart BLAST

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Summary [?]

A concise summary of the five best matches from well-studied reference species, showing phylogenetic relationships based on multiple sequence alignment and conserved protein domains. Additionally, more matches from the the non-redundant BLAST databases are included as "Additional BLAST Hits".

Query: YP_010858612.1 photosystem II protein J [Actinorhytis calapparia] ... Query length: 47 aa

photosystem II reaction center protein J ...

photosystem II reaction center protein J [Synechocystis]

39 aa protein

accession:WP_010871724.1

Alignment Sequence Identical proteins

photosystem II protein J ...

photosystem II protein J [Arabidopsis thaliana]

40 aa protein

accession:NP_051073.1

Alignment Sequence Identical proteins

Query: photosystem II protein J ...

photosystem II protein J [Actinorhytis calapparia]

47 aa protein

accession:YP_010858612.1

Sequence Identical proteins

photosystem II protein J ...

photosystem II protein J [Glycine max]

40 aa protein

accession:YP_538778.1

Alignment Sequence Identical proteins

About the database

See full multiple alignment Legend

Query sequence

nr matches

Landmark matches

Not aligned to query

Gap

Descriptions

Best hits

Select:All None Selected:0

Best hits producing significant alignments
Select for downloading or viewing reports	Description	Max score	Total score	Query cover	E value	Ident	Accession
1 Select seq ref\|NP_051073.1\|	photosystem II protein J [Arabidopsis thaliana]	73.6	73.6	85%	9e-19	95.00%	NP_051073.1
2 Select seq ref\|YP_538778.1\|	photosystem II protein J [Glycine max]	73.2	73.2	85%	1e-18	95.00%	YP_538778.1
3 Select seq ref\|WP_010871724.1\|	MULTISPECIES: photosystem II reaction center protein J [Synechocystis]	52.4	52.4	79%	3e-10	62.16%	WP_010871724.1

Summary [?]

Descriptions

Best hits

Additional BLAST Hits

Alignments